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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837843.1_cds_XP_016506807.1_20001
CDS Infomation

[gene=LOC107824530] [db_xref=GeneID:107824530] [protein=zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2] [protein_id=XP_016506807.1] [location=complement(join(310343..311254,312969..313855,314148..314381,314657..314696))] [gbkey=CDS]
Sequence

ATGGATTGGAGTGTTAACACTGCTTATAAGACCTTAAAAGATATGGAACCAAAATCCCTT
GCCGTCGTGGAAGCTACAAGTACAATCCTTCCAAACGTAGAACGTATAGATGTGGGACTT
GGAACTTCAGAGAAAGGGAATGCTACTCCTATAACAAAACCAAGGAAAAAGACCATGACA
TCAGTGTATCTCAAGTACTTTGAGACAGCTCCAGATGGGAAAACTAGGAGATGTAAATTT
TGTGGACAAAGTTATTCAATTGCAACCGCCACTGGCAACTTGGGAAGACATCTCAGCAAT
CGCCATCCAGGATATGATATAACAGTGAATGTTGCCACTCCTGCTCCACAACCGGTCACT
ATTCCCAAGAAGCTTCAACTTCAACCTCAACCTCAACCTCAAGCCAAAATACCTCAGTTG
GAGCTTGATCATTTAAACTGGTTGCTCGTCAAGTGGCTTATTCTCTCATCTCTTCCTCCT
TCTACATTGGACGAACATTGGCTTTTGAACTCATTTAAATTTCTCAGCCCGACAATAAAA
ATTTGGCCGGGGGACAAGTTCCAAACAATACTTTGTGAAGTTTTTAGAAGCATGCAGGAA
GATGTAAGGGTGATAGTGGACCGTGTTTCTTCCAAGGTCTCTATAACTCTTGATTTCTGG
ACATCTTACGAGCAACTCCTCTATATGAGTATTACTTGCCAGTGGATTGATGAAAATTGG
TCTTTTCAGAGGATGCTCCTTGATGTTTGTCACATATCTTCTCCTTGTGGGGCTGCTGAA
ATTGCTCATGCTCTACTGAAGGTCCTTAAACTGTATAATATTGACAACCGAGTCCTTTGT
TGCACCCATGATAATAGCCCAATTGCATTGCATGCATGCCATACACTCAAAGAAGACATG
GACAACCAGAAAATGAGTTCCTTTTACTATCTTCCATGCGCTGCTCATACTCTAAATTCA
ATCATAAATGATGGACTAAGATCTACGAAGTCGATAATCTCCAAAATAAGGGAGTTTGTC
TTAAAGATGAATACATCCTTGGAGATTTCTCAGGATTTTCTCCAATGTTGCAATGCTTAT
CAAGAAGGCAATTGGAAATTCCCTCTTGATGCCTCGCCTCGTTGGAGTGGCAATTATCAG
ATGTTAGACATTGCGCGGAAGGCAAGTAAATCAATGGAAGCTATTGTCCGGAAGTATGAT
GAACTAGGCAGTATGCTCCTGAGCACCGCGGAGAAGAATGCTGTGAATATAATGCATGTA
TATTTGGAACCGTTTTATAAAACCATCAATGACATATGCACAAACAAAGTACTAACAGTT
GGTTTGGTTCTTTTCTTCATGGATCATATTTCTGAAATGATCGCTGCTTGTAGAGACTCT
CGACACAGCCCTGACTGGCTCAAGAGTGCTGCTGAAGAAATGGCTACAAAAGTCCGAAGC
TATAACGACCAGGTTTGCAGTCTCTTCACATATATGACTGCAATACTTGATCCAAGAATA
AAGGTTGAGCTCCTTCCTGAAAATCTCAACTCCGAAAATTACTTGGAAGAAGCCAGAAGC
TATTTCATAAGAAATTATTCCAGCAGCCAATTTTCTGCTATCACCAGTTCTTACGCTGCA
CAGGAGCTAGAAGATGGAGGGAGTGTTTCGTTTGCAGAGGAAATTGCCCGTAAGAAACGT
AGGTCAAGTATGTCCTCTGCCACAGATGAGCTCACCCAATATTTATCAGAGCCTCCCGCT
CCAATAGCAACAAATGTCTTGGAATGGTGGAAGGTGAACAACACGCGCTACCCACGTCTA
TCGATGATGGCTCGGGACTTTCTGGCTGTACAGCCAACTGCATTGGCGCCTGAAGATCTA
TTCTGTAGCAAAGGTGATGAGATAGATAAGCAGAGGTTCTCAACACCCTATGAGAGCACC
CAAGCTTCGCATTGTGTAAAGTCATGGTTGCTAGGCGGATTTAAGTTGAAGTATAAATCA
ACTGAAGTTGATTATGAGAGGTTAATGGAATTGGCAACCGCTACAGCAGCTGAAAATACT
ACAACATGTTCCGACAAGAAACAGAAATCATGA

Peptide Sequence

PEP ID

XP_016506807.1
PEP Infomation

PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Nicotiana tabacum]
Sequence

MDWSVNTAYKTLKDMEPKSLAVVEATSTILPNVERIDVGLGTSEKGNATPITKPRKKTMT
SVYLKYFETAPDGKTRRCKFCGQSYSIATATGNLGRHLSNRHPGYDITVNVATPAPQPVT
IPKKLQLQPQPQPQAKIPQLELDHLNWLLVKWLILSSLPPSTLDEHWLLNSFKFLSPTIK
IWPGDKFQTILCEVFRSMQEDVRVIVDRVSSKVSITLDFWTSYEQLLYMSITCQWIDENW
SFQRMLLDVCHISSPCGAAEIAHALLKVLKLYNIDNRVLCCTHDNSPIALHACHTLKEDM
DNQKMSSFYYLPCAAHTLNSIINDGLRSTKSIISKIREFVLKMNTSLEISQDFLQCCNAY
QEGNWKFPLDASPRWSGNYQMLDIARKASKSMEAIVRKYDELGSMLLSTAEKNAVNIMHV
YLEPFYKTINDICTNKVLTVGLVLFFMDHISEMIAACRDSRHSPDWLKSAAEEMATKVRS
YNDQVCSLFTYMTAILDPRIKVELLPENLNSENYLEEARSYFIRNYSSSQFSAITSSYAA
QELEDGGSVSFAEEIARKKRRSSMSSATDELTQYLSEPPAPIATNVLEWWKVNNTRYPRL
SMMARDFLAVQPTALAPEDLFCSKGDEIDKQRFSTPYESTQASHCVKSWLLGGFKLKYKS
TEVDYERLMELATATAAENTTTCSDKKQKS

Transcript Sequence

Gene sequence data has not been registered.